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Phytophthora Root Rot in Citrus: Understanding, Prevention, and Treatment


As a citrus grower, you may have encountered the dreaded Phytophthora root rot disease at some point. This soil-borne pathogen is one of the most destructive diseases affecting citrus trees worldwide. Once it gains a foothold, it can quickly spread throughout the orchard and lead to significant yield losses or even kill the trees.

What is Phytophthora Root Rot?


Phytophthora root rot is caused by several species of soil-borne fungi that thrive in warm and wet conditions. These fungi attack the roots of susceptible plants, causing them to rot and die. The disease can affect all parts of a citrus tree, including leaves, stems, and fruit, but the most severe damage occurs in the root system. A tree with Phytophthora root rot may exhibit wilting, chlorosis, defoliation, stunted growth, and eventually death.

How Does Phytophthora Root Rot Spread?


Phytophthora root rot spreads through water, soil, and infected plant material. The fungi produce motile spores that can swim in water or be carried by water currents, splash, or runoff. The spores can also survive in soil for extended periods, waiting for the right environmental conditions to infect new hosts. Infected plant material, such as dead roots, fruit, or leaves, can also harbor the fungi and serve as sources of inoculum for nearby healthy trees.

Preventing Phytophthora Root Rot


Prevention is key when it comes to managing Phytophthora root rot. Here are some practices you can implement to reduce the risk of infection:

  • Choose well-drained soils and avoid planting in low-lying areas where water tends to collect.
  • Avoid over-irrigation or poor drainage, which can create favorable conditions for the fungi to thrive.
  • Use raised beds or mounds to improve drainage and increase air circulation around the roots.
  • Clean pruning tools regularly and disinfect them between trees to prevent spreading the disease.
  • Remove and burn or bury infected plant material to prevent the fungus from spreading to other trees.
  • Practice good weed control to reduce competition for water and nutrients, which can stress the trees and make them more susceptible to infection.

Treating Phytophthora Root Rot


If you suspect that your citrus trees have Phytophthora root rot, prompt action is essential to limit the damage. Here are some treatment options to consider:

  • Improve drainage and reduce irrigation to prevent further waterlogging and decrease the fungal population.
  • Add organic matter to the soil to improve its structure and promote beneficial microorganisms that can compete with the fungi.
  • Apply fungicides to the soil or trunk to protect the roots and prevent further infection. Some common fungicides used for Phytophthora control include metalaxyl, mefenoxam, and phosphorous acid.
  • Graft resistant rootstocks onto the affected trees to replace the diseased root system with a healthy one.
  • If the infection is widespread and severe, consider removing and replanting the affected trees with resistant varieties or crop rotation.


Phytophthora root rot is a serious disease that can have devastating effects on citrus production. However, by implementing preventive measures and prompt treatment, growers can minimize the risk of infection and keep their trees healthy. Remember to choose well-drained sites, maintain proper irrigation and drainage, practice good sanitation, and monitor your trees regularly for signs of disease. With proper management, you can enjoy a productive and thriving citrus orchard for years to come.

healthy citrus tree in a greenhouse
A healthy citrus tree in a greenhouse
citrus diseases, soil-borne pathogens, plant health, tree management, sustainable agriculture

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